pyiron\_atomistics.atomistics.master.parallel.MapMaster
=======================================================

.. currentmodule:: pyiron_atomistics.atomistics.master.parallel

.. autoclass:: MapMaster
   :members:
   :show-inheritance:
   :inherited-members:

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~MapMaster.__init__
      ~MapMaster.animate_structure
      ~MapMaster.animate_structures
      ~MapMaster.append
      ~MapMaster.calc_md
      ~MapMaster.calc_minimize
      ~MapMaster.calc_static
      ~MapMaster.check_if_job_exists
      ~MapMaster.check_setup
      ~MapMaster.child_hdf
      ~MapMaster.clear_job
      ~MapMaster.collect_logfiles
      ~MapMaster.collect_output
      ~MapMaster.collect_structures
      ~MapMaster.compress
      ~MapMaster.continue_with_final_structure
      ~MapMaster.continue_with_restart_files
      ~MapMaster.convergence_check
      ~MapMaster.copy
      ~MapMaster.copy_file_to_working_directory
      ~MapMaster.copy_template
      ~MapMaster.copy_to
      ~MapMaster.create_child_job
      ~MapMaster.create_job
      ~MapMaster.create_pipeline
      ~MapMaster.db_entry
      ~MapMaster.decompress
      ~MapMaster.drop_status_to_aborted
      ~MapMaster.first_child_name
      ~MapMaster.from_dict
      ~MapMaster.from_hdf
      ~MapMaster.from_hdf_args
      ~MapMaster.get
      ~MapMaster.get_calculate_function
      ~MapMaster.get_child_cores
      ~MapMaster.get_final_structure
      ~MapMaster.get_from_table
      ~MapMaster.get_input_parameter_dict
      ~MapMaster.get_job_id
      ~MapMaster.get_neighbors
      ~MapMaster.get_neighbors_snapshots
      ~MapMaster.get_output_parameter_dict
      ~MapMaster.get_structure
      ~MapMaster.get_workdir_file
      ~MapMaster.gui
      ~MapMaster.inspect
      ~MapMaster.instantiate
      ~MapMaster.interactive_close
      ~MapMaster.interactive_fetch
      ~MapMaster.interactive_flush
      ~MapMaster.interactive_ref_job_initialize
      ~MapMaster.is_compressed
      ~MapMaster.is_finished
      ~MapMaster.is_master_id
      ~MapMaster.is_self_archived
      ~MapMaster.iter_jobs
      ~MapMaster.iter_structures
      ~MapMaster.job_file_name
      ~MapMaster.kill
      ~MapMaster.list_all
      ~MapMaster.list_childs
      ~MapMaster.list_files
      ~MapMaster.list_groups
      ~MapMaster.list_nodes
      ~MapMaster.load
      ~MapMaster.map
      ~MapMaster.move_to
      ~MapMaster.output_to_pandas
      ~MapMaster.pop
      ~MapMaster.refresh_job_status
      ~MapMaster.refresh_submission_status
      ~MapMaster.relocate_hdf5
      ~MapMaster.remove
      ~MapMaster.remove_and_reset_id
      ~MapMaster.remove_child
      ~MapMaster.rename
      ~MapMaster.reset_job_id
      ~MapMaster.restart
      ~MapMaster.run
      ~MapMaster.run_if_interactive
      ~MapMaster.run_if_interactive_non_modal
      ~MapMaster.run_if_modal
      ~MapMaster.run_if_refresh
      ~MapMaster.run_if_scheduler
      ~MapMaster.run_static
      ~MapMaster.run_time_to_db
      ~MapMaster.save
      ~MapMaster.save_output
      ~MapMaster.self_archive
      ~MapMaster.self_unarchive
      ~MapMaster.set_child_id_func
      ~MapMaster.set_input_to_read_only
      ~MapMaster.show_hdf
      ~MapMaster.signal_intercept
      ~MapMaster.store_structure
      ~MapMaster.suspend
      ~MapMaster.to_dict
      ~MapMaster.to_hdf
      ~MapMaster.to_object
      ~MapMaster.trajectory
      ~MapMaster.transfer_from_remote
      ~MapMaster.transform_structures
      ~MapMaster.update_master
      ~MapMaster.validate_ready_to_run
      ~MapMaster.view_structure
      ~MapMaster.write_input
      ~MapMaster.write_traj
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~MapMaster.calculate_kwargs
      ~MapMaster.child_ids
      ~MapMaster.child_names
      ~MapMaster.child_project
      ~MapMaster.content
      ~MapMaster.database_entry
      ~MapMaster.exclude_groups_hdf
      ~MapMaster.exclude_nodes_hdf
      ~MapMaster.executable
      ~MapMaster.executor_type
      ~MapMaster.files
      ~MapMaster.files_to_compress
      ~MapMaster.files_to_remove
      ~MapMaster.id
      ~MapMaster.input
      ~MapMaster.job_id
      ~MapMaster.job_info_str
      ~MapMaster.job_name
      ~MapMaster.job_object_dict
      ~MapMaster.job_type
      ~MapMaster.logger
      ~MapMaster.master_id
      ~MapMaster.modify_function
      ~MapMaster.name
      ~MapMaster.number_jobs_total
      ~MapMaster.number_of_structures
      ~MapMaster.parent_id
      ~MapMaster.path
      ~MapMaster.project
      ~MapMaster.project_hdf5
      ~MapMaster.queue_id
      ~MapMaster.ref_job
      ~MapMaster.restart_file_dict
      ~MapMaster.restart_file_list
      ~MapMaster.server
      ~MapMaster.status
      ~MapMaster.structure
      ~MapMaster.version
      ~MapMaster.working_directory
   
   