pyiron\_atomistics.atomistics.job.sqs.SQSJob
============================================

.. currentmodule:: pyiron_atomistics.atomistics.job.sqs

.. autoclass:: SQSJob
   :members:
   :show-inheritance:
   :inherited-members:

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~SQSJob.__init__
      ~SQSJob.animate_structure
      ~SQSJob.animate_structures
      ~SQSJob.calc_md
      ~SQSJob.calc_minimize
      ~SQSJob.calc_static
      ~SQSJob.check_if_job_exists
      ~SQSJob.check_setup
      ~SQSJob.clear_job
      ~SQSJob.collect_logfiles
      ~SQSJob.collect_output
      ~SQSJob.collect_structures
      ~SQSJob.compress
      ~SQSJob.continue_with_final_structure
      ~SQSJob.continue_with_restart_files
      ~SQSJob.convergence_check
      ~SQSJob.copy
      ~SQSJob.copy_file_to_working_directory
      ~SQSJob.copy_template
      ~SQSJob.copy_to
      ~SQSJob.create_job
      ~SQSJob.create_pipeline
      ~SQSJob.db_entry
      ~SQSJob.decompress
      ~SQSJob.drop_status_to_aborted
      ~SQSJob.from_dict
      ~SQSJob.from_hdf
      ~SQSJob.from_hdf_args
      ~SQSJob.get
      ~SQSJob.get_calculate_function
      ~SQSJob.get_final_structure
      ~SQSJob.get_from_table
      ~SQSJob.get_input_parameter_dict
      ~SQSJob.get_job_id
      ~SQSJob.get_neighbors
      ~SQSJob.get_neighbors_snapshots
      ~SQSJob.get_output_parameter_dict
      ~SQSJob.get_structure
      ~SQSJob.get_workdir_file
      ~SQSJob.gui
      ~SQSJob.inspect
      ~SQSJob.instantiate
      ~SQSJob.interactive_close
      ~SQSJob.interactive_fetch
      ~SQSJob.interactive_flush
      ~SQSJob.is_compressed
      ~SQSJob.is_master_id
      ~SQSJob.is_self_archived
      ~SQSJob.iter_structures
      ~SQSJob.job_file_name
      ~SQSJob.kill
      ~SQSJob.list_all
      ~SQSJob.list_childs
      ~SQSJob.list_files
      ~SQSJob.list_groups
      ~SQSJob.list_nodes
      ~SQSJob.list_structures
      ~SQSJob.load
      ~SQSJob.map
      ~SQSJob.move_to
      ~SQSJob.refresh_job_status
      ~SQSJob.relocate_hdf5
      ~SQSJob.remove
      ~SQSJob.remove_and_reset_id
      ~SQSJob.remove_child
      ~SQSJob.rename
      ~SQSJob.reset_job_id
      ~SQSJob.restart
      ~SQSJob.run
      ~SQSJob.run_if_interactive
      ~SQSJob.run_if_interactive_non_modal
      ~SQSJob.run_if_modal
      ~SQSJob.run_if_refresh
      ~SQSJob.run_if_scheduler
      ~SQSJob.run_static
      ~SQSJob.run_time_to_db
      ~SQSJob.save
      ~SQSJob.save_output
      ~SQSJob.self_archive
      ~SQSJob.self_unarchive
      ~SQSJob.set_input_to_read_only
      ~SQSJob.show_hdf
      ~SQSJob.signal_intercept
      ~SQSJob.store_structure
      ~SQSJob.suspend
      ~SQSJob.to_dict
      ~SQSJob.to_hdf
      ~SQSJob.to_object
      ~SQSJob.trajectory
      ~SQSJob.transfer_from_remote
      ~SQSJob.transform_structures
      ~SQSJob.update_master
      ~SQSJob.validate_ready_to_run
      ~SQSJob.view_structure
      ~SQSJob.write_input
      ~SQSJob.write_traj
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~SQSJob.calculate_kwargs
      ~SQSJob.child_ids
      ~SQSJob.content
      ~SQSJob.database_entry
      ~SQSJob.exclude_groups_hdf
      ~SQSJob.exclude_nodes_hdf
      ~SQSJob.executable
      ~SQSJob.executor_type
      ~SQSJob.files
      ~SQSJob.files_to_compress
      ~SQSJob.files_to_remove
      ~SQSJob.id
      ~SQSJob.job_id
      ~SQSJob.job_info_str
      ~SQSJob.job_name
      ~SQSJob.job_type
      ~SQSJob.list_of_structures
      ~SQSJob.logger
      ~SQSJob.master_id
      ~SQSJob.name
      ~SQSJob.number_of_structures
      ~SQSJob.parent_id
      ~SQSJob.path
      ~SQSJob.project
      ~SQSJob.project_hdf5
      ~SQSJob.publication
      ~SQSJob.queue_id
      ~SQSJob.restart_file_dict
      ~SQSJob.restart_file_list
      ~SQSJob.server
      ~SQSJob.status
      ~SQSJob.structure
      ~SQSJob.version
      ~SQSJob.working_directory