pyiron\_atomistics.atomistics.job.atomistic.AtomisticGenericJob
===============================================================

.. currentmodule:: pyiron_atomistics.atomistics.job.atomistic

.. autoclass:: AtomisticGenericJob
   :members:
   :show-inheritance:
   :inherited-members:

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~AtomisticGenericJob.__init__
      ~AtomisticGenericJob.animate_structure
      ~AtomisticGenericJob.animate_structures
      ~AtomisticGenericJob.calc_md
      ~AtomisticGenericJob.calc_minimize
      ~AtomisticGenericJob.calc_static
      ~AtomisticGenericJob.check_if_job_exists
      ~AtomisticGenericJob.check_setup
      ~AtomisticGenericJob.clear_job
      ~AtomisticGenericJob.collect_logfiles
      ~AtomisticGenericJob.collect_output
      ~AtomisticGenericJob.collect_structures
      ~AtomisticGenericJob.compress
      ~AtomisticGenericJob.continue_with_final_structure
      ~AtomisticGenericJob.continue_with_restart_files
      ~AtomisticGenericJob.convergence_check
      ~AtomisticGenericJob.copy
      ~AtomisticGenericJob.copy_file_to_working_directory
      ~AtomisticGenericJob.copy_template
      ~AtomisticGenericJob.copy_to
      ~AtomisticGenericJob.create_job
      ~AtomisticGenericJob.create_pipeline
      ~AtomisticGenericJob.db_entry
      ~AtomisticGenericJob.decompress
      ~AtomisticGenericJob.drop_status_to_aborted
      ~AtomisticGenericJob.from_dict
      ~AtomisticGenericJob.from_hdf
      ~AtomisticGenericJob.from_hdf_args
      ~AtomisticGenericJob.get
      ~AtomisticGenericJob.get_calculate_function
      ~AtomisticGenericJob.get_final_structure
      ~AtomisticGenericJob.get_from_table
      ~AtomisticGenericJob.get_input_parameter_dict
      ~AtomisticGenericJob.get_job_id
      ~AtomisticGenericJob.get_neighbors
      ~AtomisticGenericJob.get_neighbors_snapshots
      ~AtomisticGenericJob.get_output_parameter_dict
      ~AtomisticGenericJob.get_structure
      ~AtomisticGenericJob.get_workdir_file
      ~AtomisticGenericJob.gui
      ~AtomisticGenericJob.inspect
      ~AtomisticGenericJob.instantiate
      ~AtomisticGenericJob.interactive_close
      ~AtomisticGenericJob.interactive_fetch
      ~AtomisticGenericJob.interactive_flush
      ~AtomisticGenericJob.is_compressed
      ~AtomisticGenericJob.is_master_id
      ~AtomisticGenericJob.is_self_archived
      ~AtomisticGenericJob.iter_structures
      ~AtomisticGenericJob.job_file_name
      ~AtomisticGenericJob.kill
      ~AtomisticGenericJob.list_all
      ~AtomisticGenericJob.list_childs
      ~AtomisticGenericJob.list_files
      ~AtomisticGenericJob.list_groups
      ~AtomisticGenericJob.list_nodes
      ~AtomisticGenericJob.load
      ~AtomisticGenericJob.map
      ~AtomisticGenericJob.move_to
      ~AtomisticGenericJob.refresh_job_status
      ~AtomisticGenericJob.relocate_hdf5
      ~AtomisticGenericJob.remove
      ~AtomisticGenericJob.remove_and_reset_id
      ~AtomisticGenericJob.remove_child
      ~AtomisticGenericJob.rename
      ~AtomisticGenericJob.reset_job_id
      ~AtomisticGenericJob.restart
      ~AtomisticGenericJob.run
      ~AtomisticGenericJob.run_if_interactive
      ~AtomisticGenericJob.run_if_interactive_non_modal
      ~AtomisticGenericJob.run_if_modal
      ~AtomisticGenericJob.run_if_refresh
      ~AtomisticGenericJob.run_if_scheduler
      ~AtomisticGenericJob.run_static
      ~AtomisticGenericJob.run_time_to_db
      ~AtomisticGenericJob.save
      ~AtomisticGenericJob.save_output
      ~AtomisticGenericJob.self_archive
      ~AtomisticGenericJob.self_unarchive
      ~AtomisticGenericJob.set_input_to_read_only
      ~AtomisticGenericJob.show_hdf
      ~AtomisticGenericJob.signal_intercept
      ~AtomisticGenericJob.store_structure
      ~AtomisticGenericJob.suspend
      ~AtomisticGenericJob.to_dict
      ~AtomisticGenericJob.to_hdf
      ~AtomisticGenericJob.to_object
      ~AtomisticGenericJob.trajectory
      ~AtomisticGenericJob.transfer_from_remote
      ~AtomisticGenericJob.transform_structures
      ~AtomisticGenericJob.update_master
      ~AtomisticGenericJob.validate_ready_to_run
      ~AtomisticGenericJob.view_structure
      ~AtomisticGenericJob.write_input
      ~AtomisticGenericJob.write_traj
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~AtomisticGenericJob.calculate_kwargs
      ~AtomisticGenericJob.child_ids
      ~AtomisticGenericJob.content
      ~AtomisticGenericJob.database_entry
      ~AtomisticGenericJob.exclude_groups_hdf
      ~AtomisticGenericJob.exclude_nodes_hdf
      ~AtomisticGenericJob.executable
      ~AtomisticGenericJob.executor_type
      ~AtomisticGenericJob.files
      ~AtomisticGenericJob.files_to_compress
      ~AtomisticGenericJob.files_to_remove
      ~AtomisticGenericJob.id
      ~AtomisticGenericJob.job_id
      ~AtomisticGenericJob.job_info_str
      ~AtomisticGenericJob.job_name
      ~AtomisticGenericJob.job_type
      ~AtomisticGenericJob.logger
      ~AtomisticGenericJob.master_id
      ~AtomisticGenericJob.name
      ~AtomisticGenericJob.number_of_structures
      ~AtomisticGenericJob.parent_id
      ~AtomisticGenericJob.path
      ~AtomisticGenericJob.project
      ~AtomisticGenericJob.project_hdf5
      ~AtomisticGenericJob.queue_id
      ~AtomisticGenericJob.restart_file_dict
      ~AtomisticGenericJob.restart_file_list
      ~AtomisticGenericJob.server
      ~AtomisticGenericJob.status
      ~AtomisticGenericJob.structure
      ~AtomisticGenericJob.version
      ~AtomisticGenericJob.working_directory